Hsp100 Molecular Chaperone ClpB and Its Role in Virulence of Bacterial Pathogens

This review focuses on the molecular chaperone ClpB that belongs to the Hsp100/Clp subfamily of the AAA+ ATPases and its biological function in selected bacterial pathogens, causing a variety of human infectious diseases, including zoonoses. It has been established that ClpB disaggregates and reactivates aggregated cellular proteins. It has been postulated that ClpB’s protein disaggregation activity supports the survival of pathogenic bacteria under host-induced stresses (e.g., high temperature and oxidative stress), which allows them to rapidly adapt to the human host and establish infection. Interestingly, ClpB may also perform other functions in pathogenic bacteria, which are required for their virulence. Since ClpB is not found in human cells, this chaperone emerges as an attractive target for novel antimicrobial therapies in combating bacterial infections.     

Split Enzyme-Based Biosensors for Structural Characterization of Soluble and Insoluble β-Glucans

β-Glucan is widely distributed in various plants and microorganisms and is composed of β-1,3-linked d-glucose units. It may have a branched short or long side chain of glucose units with β-1,6- or β-1,4-linkage. Numerous studies have investigated different β-glucans and revealed their bioactivities. To understand the structure-function relationship of β-glucan, we constructed a split-luciferase complementation assay for the structural analysis of long-chain β-1,6-branched β-1,3-glucan. The N- and C-terminal fragments of luciferase from deep-sea shrimp were fused to insect-derived β-1,3-glucan recognition protein and fungal endo-β-1,6-glucanase (Neg1)-derived β-1,6-glucan recognition protein, respectively. In this approach, two β-glucan recognition proteins bound to β-glucan molecules come into close proximity, resulting in the assembly of the full-length reporter enzyme and induction of transient luciferase activity, indicative of the structure of β-glucan. To test the applicability of this assay, β-glucan and two β-glucan recognition proteins were mixed, resulting in an increase in the luminescence intensity in a β-1,3-glucan with a long polymer of β-1,6-glucan in a dose-dependent manner. This simple test also allows the monitoring of real-time changes in the side chain structure and serves as a convenient method to distinguish between β-1,3-glucan and long-chain β-1,6-branched β-1,3-glucan in various soluble and insoluble β-glucans.     

Sequential alignment attention model for scene text recognition

Scene text recognition has been a hot research topic in computer vision due to its various applications. The state-of-the-art solutions usually depend on the attention-based encoder-decoder framework that learns the mapping between input images and output sequences in a purely data-driven way. Unfortunately, there often exists severe misalignment between feature areas and text labels in real-world scenarios. To address this problem, this paper proposes a sequential alignment attention model to enhance the alignment between input images and output character sequences. In this model, an attention gated recurrent unit (AGRU) is first devised to distinguish the text and background regions, and further extract the localized features focusing on sequential text regions. Furthermore, CTC guided decoding strategy is integrated into the popular attention-based decoder, which not only helps to boost the convergence of the training but also enhances the well-aligned sequence recognition. Extensive experiments on various benchmarks, including the IIIT5k, SVT, and ICDAR datasets, show that our method substantially outperforms the state-of-the-art methods.     

The Plants of the Asteraceae Family as Agents in the Protection of Human Health

The Asteraceae family is one of the largest flowering plant families, with over 1600 genera and 2500 species worldwide. Some of its most well-known taxa are lettuce, chicory, artichoke, daisy and dandelion. The members of the Asteraceae have been used in the diet and for medicine for centuries. Despite their wide diversity, most family members share a similar chemical composition: for example, all species are good sources of inulin, a natural polysaccharide with strong prebiotic properties. They also demonstrate strong antioxidant, anti-inflammatory and antimicrobial activity, as well as diuretic and wound healing properties. Their pharmacological effects can be attributed to their range of phytochemical compounds, including polyphenols, phenolic acids, flavonoids, acetylenes and triterpenes. One such example is arctiin: a ligand with numerous antioxidant, antiproliferative and desmutagenic activities. The family is also a source of sesquiterpene lactones: the secondary metabolites responsible for the bitter taste of many plants. This mini review examines the current state of literature regarding the positive effect of the Asteraceae family on human health.     

Supramolecular Zn(II)-Dipicolylamine-Azobenzene-Aminocyclodextrin-ATP Complex: Design and ATP Recognition in Water

Cyclodextrins (CyDs) are water-soluble host molecules possessing a nanosized hydrophobic cavity. In the realm of molecular recognition, this cavity is used not only as a recognition site but also as a reaction medium, where a hydrophobic sensor recognizes a guest molecule. Based on the latter concept, we have designed a novel supramolecular sensing system composed of Zn(II)-dipicolylamine metal complex-based azobenzene (1-Zn) and 3A-amino-3A-deoxy-(2AS,3AS)-γ-cyclodextrin (3-NH₂-γ-CyD) for sensing adenosine-5′-triphosphate (ATP). 1-Zn showed redshifts in the UV-Vis spectra and induced circular dichroism (ICD) only when both ATP and 3-NH₂-γ-CyD were present. Calculations of equilibrium constants indicated that the amino group of 3-NH₂-γ-CyD was involved in the formation of supramolecular 1-Zn/3-NH₂-γ-CyD/ATP. The Job plot of the ICD spectral response revealed that the stoichiometry of 1-Zn/3-NH₂-γ-CyD/ATP was 2:1:1. The pH effect was examined and 1-Zn/3-NH₂-γ-CyD/ATP was most stable in the neutral condition. The NOESY spectrum suggested the localization of 1-Zn in the 3-NH₂-γ-CyD cavity. Based on the obtained results, the metal coordination interaction of 1-Zn and the electrostatic interaction of 3-NH₂-γ-CyD were found to take place for ATP recognition. The “reaction medium approach” enabled us to develop a supramolecular sensing system that undergoes multi-point interactions in water. This study is the first step in the design of a selective sensing system based on a good understanding of supramolecular structures.     

Transglycosylation Activity of Engineered Bifidobacterium Lacto-N-Biosidase Mutants at Donor Subsites for Lacto-N-Tetraose Synthesis

The health benefits of human milk oligosaccharides (HMOs) make them attractive targets as supplements for infant formula milks. However, HMO synthesis is still challenging and only two HMOs have been marketed. Engineering glycoside hydrolases into transglycosylases may provide biocatalytic routes to the synthesis of complex oligosaccharides. Lacto-N-biosidase from Bifidobacterium bifidum (LnbB) is a GH20 enzyme present in the gut microbiota of breast-fed infants that hydrolyzes lacto-N-tetraose (LNT), the core structure of the most abundant type I HMOs. Here we report a mutational study in the donor subsites of the substrate binding cleft with the aim of reducing hydrolytic activity and conferring transglycosylation activity for the synthesis of LNT from p-nitrophenyl β-lacto-N-bioside and lactose. As compared with the wt enzyme with negligible transglycosylation activity, mutants with residual hydrolase activity within 0.05% to 1.6% of the wild-type enzyme result in transglycosylating enzymes with LNT yields in the range of 10–30%. Mutations of Trp394, located in subsite -1 next to the catalytic residues, have a large impact on the transglycosylation/hydrolysis ratio, with W394F being the best mutant as a biocatalyst producing LNT at 32% yield. It is the first reported transglycosylating LnbB enzyme variant, amenable to further engineering for practical enzymatic synthesis of LNT.     

认同度修正下的近相邻改进推荐算法研究

如何融合多方因素准确地为用户提供个性化产品一直是关注的热点问题，由此，一个新的近相邻改进算法融入了大众化认同度和个性化认同度，利于更加高效地挖掘隐藏信息。实验结果表明，相对于传统近相邻算法，认同度修正算法虽然查全率小幅度上下波动，但其他多个评价指标都得到极大提升，假正率和深度有所减少，查准率、[F1]值和提升度得以增加，并且，受试者特征曲线和提升曲线也都说明此修正算法具有更为显著的推荐效果。     

基于改进Faster R-CNN及YOLO的大角度车牌识别算法

随着大数据时代的到来,智慧城市等一系列概念的提出,人工智能开始在城市各个角落得到广泛应用。其中,车牌识别作为城市道路交通重要的一环,也取得了重大突破。基于深度学习的车牌识别一经提出,各类算法应用于车牌检测及识别上,对比于传统的车牌识别,大大提高了识别的速率和准确率。然而,在非限制条件下,如大角度车牌识别准确率仍有提升的空间。提出了一种改进的FasterR-CNN与YOLO的深度学习车牌识别算法,将对大角度下的车牌识别准确率达到了99.7%。由于是轻量型的框架,为后续的移动设备部署工作提供了便利。     

High-roubustness keystroke recognition method based on acoustic spatial gradient

For the fluctuation of CFCC caused by environmental noise is the main reason for the low accuracy of keystroke detection,the spatial characteristics of adjacent between CFCC were studied,and the spatial gradient structure of CFCC based on points was established.On this basis,the effect of CFCC spatial gradient on keystroke content recognition and the selection of precise neighborhood points were studied on training and testing.Finally,a high-robustness keystroke recognition algorithm based on acoustic signals was constructed.Extensive experiments in different environments demonstrate that the proposed CFCC spatial gradient sound feature achieves great performance and the recognition accuracy is 96.15%.